green flags are supported by the latest development build.

The following documented PLINK 1.07 flags are not supported by 1.90 beta 7:Ĭontinue using PLINK 1.07 for most of these operations. Source code, compilation instructions, and the like are on the developer page. ģ: You need to have Rosetta 2 installed to run this on M1 Macs. ( What's new?) ( Credits.) ( Methods paper.) (Usage questions should be sent to the plink2-users Google group, not Christopher's email.) Binary downloadsġ: Solaris is no longer explicitly supported, but it should be able to run the Linux binaries.Ģ: These are just mirrors of the binaries posted at. It seems that the MinION software is developed for and works best under Windows, and from what I can tell, there have been issues with Linux.This is a comprehensive update to Shaun Purcell's PLINK command-line program, developed by Christopher Chang with support from the NIH-NIDDK's Laboratory of Biological Modeling, the Purcell Lab, and others. The Mac Pro seems most likely to work straight out of the box and give us the least headaches, but it is also much more expensive than comparable Windows/Linux boxes. Custom workstation running Windows 10 and booting Ubuntu off of a USB (Bioinformatics performance reduced?) Custom workstation running Windows 10 and Ubuntu 14.0.4 virtually (Bioinformatics performance reduced?)Ħ. Custom workstation with Windows 10/Ubuntu 14.0.4 dual boot (Was told this is not stable)ĥ. Custom workstation running Ubuntu 14.0.4 (The sequencer software doesn’t seem to work well in Ubuntu)Ĥ. Custom workstation running Windows 10 (Does the new Ubuntu bash work well enough? I have seen a lot of issues with Cygwin in my Googling)ģ. Apple Mac Pro ($$$ and less powerful than the rest)Ģ. I would be very interested to hear any opinions regarding our options:ġ. I am a wet labbie who has been given this task, so I am looking for an easy-to-use solution that will not break the bank. We are looking at a desktop machine (not a cluster) that we can use both for running the MinION and for the downstream bioinformatics (e.g. It looks like we may be purchasing a new computer to run our newest sequencer (Oxford Nanopore MinION).

Bioinformatics workstation 2017 mac pro